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java.lang.Objectorg.biojava.bio.structure.io.FileConvert
public class FileConvert
Methods to convert a structure object into different file formats.
Constructor Summary | |
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FileConvert(Structure struc)
Constructs a FileConvert object. |
Method Summary | |
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boolean |
doPrintConnections()
returns if the Connections should be added default is true; |
void |
setPrintConnections(boolean printConnections)
enable/disable printing of connections connections are sometimes buggy in PDB files so there are some cases where one might turn this off. |
void |
toDASStructure(XMLWriter xw)
convert a protein Structure to a DAS Structure XML response . |
java.lang.String |
toPDB()
Convert a structure into a PDB file. |
Methods inherited from class java.lang.Object |
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clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
Constructor Detail |
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public FileConvert(Structure struc)
struc
- a Structure objectMethod Detail |
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public boolean doPrintConnections()
public void setPrintConnections(boolean printConnections)
printConnections
- public java.lang.String toPDB()
public void toDASStructure(XMLWriter xw) throws java.io.IOException
xw
- a XMLWriter object
java.io.IOException
- ...
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