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java.lang.Objectorg.biojavax.bio.seq.io.SimpleRichSequenceBuilderFactory
public class SimpleRichSequenceBuilderFactory
Generates RichSequenceBuilder objects.
RichSequenceBuilder
Field Summary |
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Fields inherited from interface org.biojavax.bio.seq.io.RichSequenceBuilderFactory |
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FACTORY, PACKED, THRESHOLD, THRESHOLD_VALUE |
Constructor Summary | |
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SimpleRichSequenceBuilderFactory()
Creates a new instance of SimpleRichSequenceBuilderFactory |
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SimpleRichSequenceBuilderFactory(SymbolListFactory fact)
Creates a new instance of SimpleRichSequenceBuilderFactory |
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SimpleRichSequenceBuilderFactory(SymbolListFactory fact,
int threshold)
Creates a new instance of SimpleRichSequenceBuilderFactory that uses a specified factory for SymbolLists longer than a specified
length. |
Method Summary | |
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SequenceBuilder |
makeSequenceBuilder()
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Methods inherited from class java.lang.Object |
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clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
Constructor Detail |
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public SimpleRichSequenceBuilderFactory()
public SimpleRichSequenceBuilderFactory(SymbolListFactory fact)
fact
- the factory to use when building the SymbolList
.public SimpleRichSequenceBuilderFactory(SymbolListFactory fact, int threshold)
SymbolLists
longer than a specified
length. Before that a SimpleSymbolListFacotry
is used.
fact
- the factory to use when building the SymbolList
.threshold
- the threshold to exceed before using this factoryMethod Detail |
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public SequenceBuilder makeSequenceBuilder()
makeSequenceBuilder
in interface SequenceBuilderFactory
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