Methods in org.biojava.bio.program.ssaha that return DataStore |
DataStore |
MappedDataStoreFactory.buildDataStore(java.io.File storeFile,
SequenceDB seqDB,
Packing packing,
int wordLength,
int threshold)
|
DataStore |
DataStoreFactory.buildDataStore(java.io.File storeFile,
SequenceDB seqDB,
Packing packing,
int wordLength,
int threshold)
Build a new DataStore. |
DataStore |
CompactedDataStoreFactory.buildDataStore(java.io.File storeFile,
SequenceDB seqDB,
Packing packing,
int wordLength,
int threshold)
|
DataStore |
NIODataStoreFactory.buildDataStore(java.io.File storeFile,
SequenceDB seqDB,
Packing packing,
int wordLength,
int threshold)
|
DataStore |
CompactedDataStoreFactory.buildDataStore(java.io.File storeFile,
SequenceStreamer streamer,
Packing packing,
int wordLength,
int stepSize,
int threshold)
|
DataStore |
MappedDataStoreFactory.getDataStore(java.io.File storeFile)
|
DataStore |
DataStoreFactory.getDataStore(java.io.File storeFile)
Get a pre-built data store associated with a file. |
DataStore |
CompactedDataStoreFactory.getDataStore(java.io.File storeFile)
|
DataStore |
NIODataStoreFactory.getDataStore(java.io.File storeFile)
|