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java.lang.Objectorg.biojava.bio.dp.twohead.DPInterpreter
public class DPInterpreter
Nested Class Summary | |
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static class |
DPInterpreter.Maker
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Constructor Summary | |
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DPInterpreter(DP dp)
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Method Summary | |
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CellCalculator |
backwards(ScoreType scoreType)
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CellCalculator |
forwards(ScoreType scoreType)
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CellCalculator |
viterbi(ScoreType scoreType,
BackPointer terminal)
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Methods inherited from class java.lang.Object |
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clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
Constructor Detail |
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public DPInterpreter(DP dp)
Method Detail |
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public CellCalculator forwards(ScoreType scoreType) throws IllegalSymbolException, IllegalAlphabetException, IllegalTransitionException
forwards
in interface CellCalculatorFactory
IllegalSymbolException
IllegalAlphabetException
IllegalTransitionException
public CellCalculator backwards(ScoreType scoreType) throws IllegalSymbolException, IllegalAlphabetException, IllegalTransitionException
backwards
in interface CellCalculatorFactory
IllegalSymbolException
IllegalAlphabetException
IllegalTransitionException
public CellCalculator viterbi(ScoreType scoreType, BackPointer terminal) throws IllegalSymbolException, IllegalAlphabetException, IllegalTransitionException
viterbi
in interface CellCalculatorFactory
IllegalSymbolException
IllegalAlphabetException
IllegalTransitionException
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