org.biojava.bio.program.homologene
Class SimpleOrthoPairCollection

java.lang.Object
  extended by org.biojava.bio.program.homologene.AbstractOrthoPairCollection
      extended by org.biojava.bio.program.homologene.SimpleOrthoPairCollection
All Implemented Interfaces:
OrthoPairCollection
Direct Known Subclasses:
SimpleHomologeneDB

public class SimpleOrthoPairCollection
extends AbstractOrthoPairCollection


Nested Class Summary
 class SimpleOrthoPairCollection.Iterator
           
 
Field Summary
protected  java.util.Set groups
           
 
Constructor Summary
SimpleOrthoPairCollection()
           
 
Method Summary
 void add(OrthoPairSet group)
           
 boolean contains(OrthoPairSet group)
           
 boolean isEmpty()
           
 OrthoPairCollection.Iterator iterator()
           
 
Methods inherited from class org.biojava.bio.program.homologene.AbstractOrthoPairCollection
filter
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Field Detail

groups

protected java.util.Set groups
Constructor Detail

SimpleOrthoPairCollection

public SimpleOrthoPairCollection()
Method Detail

add

public void add(OrthoPairSet group)
Specified by:
add in interface OrthoPairCollection
Specified by:
add in class AbstractOrthoPairCollection

contains

public boolean contains(OrthoPairSet group)
Specified by:
contains in interface OrthoPairCollection
Specified by:
contains in class AbstractOrthoPairCollection

isEmpty

public boolean isEmpty()
Specified by:
isEmpty in interface OrthoPairCollection
Specified by:
isEmpty in class AbstractOrthoPairCollection

iterator

public OrthoPairCollection.Iterator iterator()
Specified by:
iterator in interface OrthoPairCollection
Specified by:
iterator in class AbstractOrthoPairCollection