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Packages that use AlignedPosition | |
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org.biojava.bio.structure.gui | A few convenience classes to view protein structures with Jmol (if it is on the classpath), to calculate a protein structure alignment and to investigate the internals of the protein structure alignment algorithm. |
org.biojava.bio.structure.gui.events | Some event classes for the protein structure GUIs. |
org.biojava.bio.structure.gui.util | Some utility classes for the protein structure GUIs. |
Uses of AlignedPosition in org.biojava.bio.structure.gui |
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Methods in org.biojava.bio.structure.gui that return types with arguments of type AlignedPosition | |
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java.util.List<AlignedPosition> |
SequenceDisplay.getAligMap()
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Uses of AlignedPosition in org.biojava.bio.structure.gui.events |
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Methods in org.biojava.bio.structure.gui.events with parameters of type AlignedPosition | |
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void |
JmolAlignedPositionListener.mouseOverPosition(AlignedPosition p)
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void |
AlignmentPositionListener.mouseOverPosition(AlignedPosition p)
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void |
JmolAlignedPositionListener.positionSelected(AlignedPosition p)
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void |
AlignmentPositionListener.positionSelected(AlignedPosition p)
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void |
JmolAlignedPositionListener.rangeSelected(AlignedPosition start,
AlignedPosition end)
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void |
AlignmentPositionListener.rangeSelected(AlignedPosition start,
AlignedPosition end)
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Uses of AlignedPosition in org.biojava.bio.structure.gui.util |
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Method parameters in org.biojava.bio.structure.gui.util with type arguments of type AlignedPosition | |
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void |
SequenceScalePanel.setAligMap(java.util.List<AlignedPosition> apos)
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