17 #ifndef __Speckley_BRICK_H__ 18 #define __Speckley_BRICK_H__ 20 #include <speckley/SpeckleyDomain.h> 46 double y1,
double z1,
int d0=-1,
int d1=-1,
int d2=-1,
47 const std::vector<double>& points = std::vector<double>(),
48 const std::vector<int>& tags = std::vector<int>(),
62 virtual std::string getDescription()
const;
74 virtual void write(
const std::string& filename)
const;
81 void dump(
const std::string& filename)
const;
100 int byteOrder,
int dataType)
const;
107 const dim_t* borrowSampleReferenceIDs(
int fsType)
const;
113 virtual bool ownSample(
int fsType,
index_t id)
const;
134 virtual dim_t getNumDataPointsGlobal()
const;
141 virtual void Print_Mesh_Info(
const bool full=
false)
const;
178 virtual double getLocalCoordinate(
index_t index,
int dim)
const;
184 virtual boost::python::tuple getGridParameters()
const;
193 const boost::python::tuple& filter)
const;
217 virtual dim_t getNumNodes()
const;
218 virtual dim_t getNumElements()
const;
219 virtual dim_t getNumDOF()
const;
223 virtual void assembleIntegrate(std::vector<real_t>& integrals,
225 virtual void assembleIntegrate(std::vector<cplx_t>& integrals,
233 Assembler_ptr createAssembler(std::string type,
const DataMap& constants)
const;
236 virtual void balanceNeighbours(
escript::Data& data,
bool average)
const;
240 template<
typename Scalar>
242 template<
typename Scalar>
244 template<
typename Scalar>
246 template<
typename Scalar>
248 template<
typename Scalar>
250 template<
typename Scalar>
252 template<
typename Scalar>
254 template<
typename Scalar>
256 template<
typename Scalar>
259 template<
typename Scalar>
261 template<
typename Scalar>
263 template<
typename Scalar>
265 template<
typename Scalar>
267 template<
typename Scalar>
269 template<
typename Scalar>
271 template<
typename Scalar>
273 template<
typename Scalar>
275 template<
typename Scalar>
278 template<
typename Scalar>
279 void integral_order2(std::vector<Scalar>&,
const escript::Data&)
const;
280 template<
typename Scalar>
281 void integral_order3(std::vector<Scalar>&,
const escript::Data&)
const;
282 template<
typename Scalar>
283 void integral_order4(std::vector<Scalar>&,
const escript::Data&)
const;
284 template<
typename Scalar>
285 void integral_order5(std::vector<Scalar>&,
const escript::Data&)
const;
286 template<
typename Scalar>
287 void integral_order6(std::vector<Scalar>&,
const escript::Data&)
const;
288 template<
typename Scalar>
289 void integral_order7(std::vector<Scalar>&,
const escript::Data&)
const;
290 template<
typename Scalar>
291 void integral_order8(std::vector<Scalar>&,
const escript::Data&)
const;
292 template<
typename Scalar>
293 void integral_order9(std::vector<Scalar>&,
const escript::Data&)
const;
294 template<
typename Scalar>
295 void integral_order10(std::vector<Scalar>&,
const escript::Data&)
const;
297 template<
typename Scalar>
298 void assembleIntegrateWorker(std::vector<Scalar>& integrals,
301 template<
typename Scalar>
306 void setCornerNeighbours();
307 void shareEdges(
escript::Data& out,
int rx,
int ry,
int rz)
const;
308 void shareFaces(
escript::Data& out,
int rx,
int ry,
int rz)
const;
317 void populateSampleIds();
319 template<
typename ValueType>
320 void readBinaryGridImpl(
escript::Data& out,
const std::string& filename,
323 #ifdef ESYS_HAVE_BOOST_IO 324 template<
typename ValueType>
329 template<
typename ValueType>
331 const std::string& filename,
int byteOrder)
const;
333 dim_t findNode(
const double *coords)
const;
337 long seed,
const boost::python::tuple& filter)
const;
340 int neighbour_ranks[8];
344 bool neighbour_exists[8];
391 return m_nodeId[node];
396 return (m_gNE[0]*m_order+1)*(m_gNE[1]*m_order+1)*(m_gNE[2]*m_order+1);
401 ESYS_ASSERT(dim>=0 && dim<m_numDim,
"'dim' out of bounds");
402 ESYS_ASSERT(index>=0 && index<m_NN[dim],
"'index' out of bounds");
404 + m_dx[dim]*(m_offset[dim] + index/m_order
410 return boost::python::make_tuple(
411 boost::python::make_tuple(m_origin[0], m_origin[1], m_origin[2]),
412 boost::python::make_tuple(m_dx[0], m_dx[1], m_dx[2]),
413 boost::python::make_tuple(m_gNE[0], m_gNE[1], m_gNE[2]));
419 return getNumNodes();
425 return m_NN[0] * m_NN[1] * m_NN[2];
431 return m_NE[0]*m_NE[1]*m_NE[2];
436 #endif // __Speckley_BRICK_H__ Definition: FunctionSpace.h:34
Definition: AbstractAssembler.cpp:18
SpeckleyDomain extends the AbstractContinuousDomain interface for the Speckley library and is the bas...
Definition: speckley/src/SpeckleyDomain.h:84
escript::Data readBinaryGridFromZipped(std::string filename, escript::FunctionSpace fs, const object &pyShape, double fill, int byteOrder, int dataType, const object &pyFirst, const object &pyNum, const object &pyMultiplier, const object &pyReverse)
Definition: speckleycpp.cpp:85
bool probeInterpolationAcross(int fsType_source, const escript::AbstractDomain &domain, int fsType_target, int dim)
Definition: CrossDomainCoupler.cpp:31
IndexVector m_elementId
Definition: speckley/src/Brick.h:378
virtual dim_t getDofOfNode(dim_t node) const
Definition: speckley/src/Brick.h:389
IndexVector m_dofId
vector of sample reference identifiers
Definition: speckley/src/Brick.h:376
virtual dim_t getNumDOF() const
returns the number of degrees of freedom per MPI rank
Definition: speckley/src/Brick.h:417
Definition: speckley/src/DefaultAssembler3D.h:31
virtual IndexVector getNodeDistribution() const
returns the node distribution vector
Definition: speckley/src/Brick.h:166
virtual const int * getNumSubdivisionsPerDim() const
returns the number of spatial subdivisions in each dimension
Definition: speckley/src/Brick.h:172
Definition: CrossDomainCoupler.h:28
std::map< std::string, escript::Data > DataMap
Definition: speckley/src/domainhelpers.h:24
virtual dim_t getNumDataPointsGlobal() const
returns the number of data points summed across all MPI processes
Definition: speckley/src/Brick.h:394
std::vector< int > ShapeType
The shape of a single datapoint.
Definition: DataTypes.h:42
#define Speckley_DLL_API
Definition: speckley/src/system_dep.h:22
const double * getLength() const
returns the lengths of the domain
Definition: speckley/src/Brick.h:214
Structure that wraps parameters for the grid reading routines.
Definition: speckley/src/SpeckleyDomain.h:51
int index_t
type for array/matrix indices used both globally and on each rank
Definition: DataTypes.h:59
boost::shared_ptr< SubWorld > SubWorld_ptr
Definition: SubWorld.h:146
escript::Data readNcGrid(std::string filename, std::string varname, escript::FunctionSpace fs, const object &pyShape, double fill, const object &pyFirst, const object &pyNum, const object &pyMultiplier, const object &pyReverse)
Definition: speckleycpp.cpp:114
Data represents a collection of datapoints.
Definition: Data.h:63
IndexVector m_nodeDistribution
Definition: speckley/src/Brick.h:381
std::vector< index_t > IndexVector
Definition: Speckley.h:43
virtual dim_t getNumElements() const
returns the number of elements per MPI rank
Definition: speckley/src/Brick.h:429
escript::Data readBinaryGrid(std::string filename, escript::FunctionSpace fs, const object &pyShape, double fill, int byteOrder, int dataType, const object &pyFirst, const object &pyNum, const object &pyMultiplier, const object &pyReverse)
Definition: speckleycpp.cpp:60
std::map< std::string, int > TagMap
Definition: Speckley.h:45
virtual boost::python::tuple getGridParameters() const
returns the tuple (origin, spacing, number_of_elements)
Definition: speckley/src/Brick.h:408
Brick is the 3-dimensional implementation of a SpeckleyDomain.
Definition: speckley/src/Brick.h:32
const double point_locations[][11]
Definition: Speckley.h:60
Definition: speckley/src/WaveAssembler3D.h:31
virtual dim_t getNumNodes() const
returns the number of nodes per MPI rank
Definition: speckley/src/Brick.h:423
virtual double getLocalCoordinate(index_t index, int dim) const
returns the index'th coordinate value in given dimension for this rank
Definition: speckley/src/Brick.h:399
Base class for all escript domains.
Definition: AbstractDomain.h:45
#define ESYS_ASSERT(a, b)
EsysAssert is a MACRO that will throw an exception if the boolean condition specified is false...
Definition: Assert.h:78
virtual const dim_t * getNumNodesPerDim() const
returns the number of nodes per MPI rank in each dimension
Definition: speckley/src/Brick.h:147
IndexVector m_nodeId
Definition: speckley/src/Brick.h:377
virtual const dim_t * getNumFacesPerBoundary() const
returns the number of face elements in the order (left,right,bottom,top,front,back) on current MPI ra...
Definition: speckley/src/Brick.h:160
index_t dim_t
Definition: DataTypes.h:64
virtual const dim_t * getNumElementsPerDim() const
returns the number of elements per MPI rank in each dimension
Definition: speckley/src/Brick.h:153